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Analysis of the ICE1-dependent ICE1, ZC3H8, ICE2, ELL1 and AFF4 cistromes in human HCT116 epithelial cells
Overview
Dataset Name :
Analysis of the ICE1-dependent ICE1, ZC3H8, ICE2, ELL1 and AFF4 cistromes in human HCT116 epithelial cells
Description :
Human HCT116 epithelial cells were treated for 48 h with ICE1 shRNA and subjected to ICE1(aa 1872-2266), ZC3H8, ICE2, ELL1 and AFF4 ChIP-Seq.
Dataset Type :
Cistromics (ChIP-Seq)
Release Date :
April 23, 2018
DOI :
10.1621/a3HpqeUHM5
Version :
This is Version 1.0 of an annotated derivative of the original dataset, which can be found in SRP026044
Dataset Citation :
Hu D, Smith ER, Garruss AS, Mohaghegh N, Varberg JM, Lin C, Jackson J, Gao X, Saraf A, Florens L, Washburn MP, Eissenberg JC and Shilatifard A. (2013) Analysis of the ICE1-dependent ICE1, ZC3H8, ICE2, ELL1 and AFF4 cistromes in human HCT116 epithelial cells, v 1.0 Signaling Pathways Project Datasets. 10.1621/a3HpqeUHM5
Download Citation :

Associated Article :
Hu D, Smith ER, Garruss AS, Mohaghegh N, Varberg JM, Lin C, Jackson J, Gao X, Saraf A, Florens L, Washburn MP, Eissenberg JC and Shilatifard A (2013) The little elongation complex functions at initiation and elongation phases of snRNA gene transcription. Mol. Cell 51 493-505 View Abstract | View PubMed
The little elongation complex functions at initiation and elongation phases of snRNA gene transcription.

Experiments

There are 7 Experiments for this dataset. Up to the top 100 MACS2 peak scores are displayed for each. Please download the dataset to view all data points.

  • 1 | ZC3H8 IP
  • 2 | ICE2 IP
  • 3 | ICE1 IP - Rep 2
  • 4 | ICE1 IP - Rep 1
  • 5 | ICE1 IP | ICE1 KD
  • 6 | ELL1 IP
  • 7 | AFF4 IP
Gene List
Experiment Information
Name : ZC3H8 IP
Description :

Human HCT116 epithelial cells were subjected to ZC3H8 ChIP-Seq.

Tissue/Cell line : epithelium, HCT116 cells
Species : Human